WormBase Tree Display for Gene: WBGene00152434

WBGene00152434 SMap: S_parent: Sequence: Cbre_Contig156
  Identity: Version: 2
    Name: CGC_name: Cbn-atf-2.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN13709
      Molecular_name: CBN13709
        CBN13709.1
        CN17678
      Public_name: Cbn-atf-2.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-atf-2.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atf
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 13.5646 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        27.1291 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 17.789 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        5.92142 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        8.49637 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        9.50166 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        9.77538 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 57.5798 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        57.6973 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        57.8149 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (14)
      WBls:0000101 1.79859 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        6.14161 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00213327
      00213328
    Ortholog (29)
    Paralog: WBGene00140645 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00141190 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00144884 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194524 Caenorhabditis brenneri From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans atf-2. In C. elegans, atf-2 is involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN13709
    Corresponding_transcript: CBN13709.1
    Other_sequence: Dviv_isotig14055
      Dviv_isotig14056
      JI168348.1
  Method: Gene