Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00149121

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00149121SMapS_parentSequenceCbre_Contig72
IdentityVersion2
NameCGC_nameCbn-trm-2AFrom_analysisInferred_from_orthology
Sequence_nameCBN10396
Molecular_nameCBN10396
CBN10396.1
CN21451
Public_nameCbn-trm-2A
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-trm-2A
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtrm
RNASeq_FPKMWBls:0000002 (11)
WBls:000000414.632From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
29.2639From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002410.3343From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
12.6388From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
13.9186From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
18.3219From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
21.2337From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:000003813.9939From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
15.5834From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
17.1729From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:000010110.8772From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
5.20033From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00210602
00210603
00210604
00210605
Ortholog (28)
ParalogWBGene00192295Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity and RNA methyltransferase activity. Predicted to be involved in RNA processing. Is an ortholog of C. elegans trm-2A.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN10396
Corresponding_transcriptCBN10396.1
Other_sequence (20)
Experimental_infoMicroarray_resultsGPL14142_CBN10396_740-799_0.876_37_C
GPL14142_CBN10396_1397-1456_0.927_4_B
MethodGene