WormBase Tree Display for Gene: WBGene00144884

WBGene00144884 SMap: S_parent: Sequence: Cbre_Contig1071
  Identity: Version: 2
    Name: CGC_name: Cbn-atf-2.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN06159
      Molecular_name: CBN06159
        CBN06159.1
        CN24928
      Public_name: Cbn-atf-2.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-atf-2.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atf
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 1.84731 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        3.69463 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        3.2138 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        3.39855 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        3.4162 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        4.18945 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        7.24154 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 5.04836 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        5.86332 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        6.67828 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (11)
      WBls:0000101 0.47799 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        1.43827 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00207256
      00207257
    Ortholog (29)
    Paralog: WBGene00140645 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00141190 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00152434 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194524 Caenorhabditis brenneri From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans atf-2. In C. elegans, atf-2 is involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN06159
    Corresponding_transcript: CBN06159.1
    Other_sequence: CJC10881_1
      JI474868.1
      Tcir_isotig07550
  Experimental_info: Microarray_results: GPL14142_CBN06159_282-341_0.779_117_B
      GPL14142_CBN06159_851-910_0.933_4_A
      GPL14142_CBN06159_1182-1241_0.919_12_C
  Method: Gene