WormBase Tree Display for Gene: WBGene00142391

WBGene00142391 SMap: S_parent: Sequence: Cbre_Contig103
  Identity: Version: 2
    Name: CGC_name: Cbn-rde-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN03666
      Molecular_name: CBN03666
        CBN03666.1
        CN31262
      Public_name: Cbn-rde-1.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-rde-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rde
    RNASeq_FPKM: WBls:0000002 0.113122 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.226244 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        0.389571 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.507365 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.72935 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.966362 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        2.76212 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        2.17525 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        4.35049 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 1.20068 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        3.14905 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        3.19924 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        3.43833 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        3.81259 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 1.8669 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        2.3694 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        2.8719 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (16)
      WBls:0000101 1.8669 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        2.75735 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00205110
    Ortholog (31)
    Paralog (65)
    Structured_description: Automated_description: Predicted to enable nucleic acid binding activity. Is an ortholog of C. elegans rde-1. In C. elegans, rde-1 is involved in obsolete conversion of ds siRNA to ss siRNA involved in RNA interference; regulatory ncRNA-mediated heterochromatin formation; and regulatory ncRNA-mediated post-transcriptional gene silencing. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN03666
    Corresponding_CDS_history: CBN03666:np197
    Corresponding_transcript: CBN03666.1
    Other_sequence (20)
  Experimental_info: Microarray_results: GPL14142_CBN03666_2040-2099_0.887_19_B
      GPL14142_CBN03666_2121-2180_0.872_29_A
      GPL14142_CBN03666_2661-2720_0.618_335_C
  Method: Gene