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WormBase Tree Display for Gene: WBGene00142357

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Name Class

WBGene00142357SMapS_parentSequenceCbre_Contig17
IdentityVersion3
NameSequence_nameCBN03632
Molecular_nameCBN03632
CBN03632.1
CN03524
Public_nameCBN03632
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
204 Feb 2020 15:43:56WBPerson1983Name_changeCGC_nameCbn-gadr-5
304 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000021.13369From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
1.49036From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
2.40841From_analysisRNASeq.brenneri.WBls:0000002.control_mean
2.42118From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
2.5811From_analysisRNASeq.brenneri.WBls:0000002.control_median
2.74103From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
3.41332From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
3.74154From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
4.06078From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
5.08215From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
34.8171From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
69.6341From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002410.8454From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
11.0913From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
11.8425From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
12.0259From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
9.88691From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
WBls:000003810.4381From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
8.18595From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
9.31203From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
WBls:000004112.6782From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
13.7854From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
14.4391From_analysisRNASeq.brenneri.WBls:0000041.control_median
15.0929From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
1.9024From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
19.037From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
19.1416From_analysisRNASeq.brenneri.WBls:0000041.control_mean
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
20.5027From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
20.6396From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
31.833From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
33.4671From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
51.988From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
58.2042From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
7.99545From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
9.37618From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
9.76277From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
WBls:000010113.5035From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
7.99545From_analysisRNASeq.brenneri.total_over_all_stages.control_median
OrthologWBGene00010365Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00010580Caenorhabditis elegansFrom_analysisTreeFam
WBGene00010585Caenorhabditis elegansFrom_analysisTreeFam
WBGene00045058Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00061476Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00067292Caenorhabditis remaneiFrom_analysisInparanoid_8
ParalogWBGene00139523Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00140117Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00159849Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00152006Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00151873Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00164715Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00163131Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00153630Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00150812Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00142947Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00157562Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00156939Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151692Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00150690Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00145340Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00148331Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00150485Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00158529Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00160786Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00163592Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00140714Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00144496Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164108Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190319Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139252
WBGene00146482
WBGene00154730
WBGene00154824
WBGene00154996
WBGene00161463
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Leucine-rich repeat domain superfamily. Is an ortholog of C. elegans H04D03.4; K05C4.9; and K05C4.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN03632
Corresponding_transcriptCBN03632.1
Experimental_infoMicroarray_resultsGPL14142_CBN03632_2154-2213_0.948_1_A
Remark[200603 pad] The CGC name Cbn-gadr-5 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene