WormBase Tree Display for Gene: WBGene00140241

WBGene00140241 SMap: S_parent: Sequence: Cbre_Contig72
  Identity: Version: 2
    Name: CGC_name: Cbn-sqv-6 From_analysis: Inferred_from_orthology
      Sequence_name: CBN01516
      Molecular_name: CBN01516
        CBN01516.1
        CN29753
      Public_name: Cbn-sqv-6
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:50 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-sqv-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sqv
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 19.2959 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        38.5918 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        4.94295 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        5.88965 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        6.21159 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        7.82339 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        8.15053 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 12.4669 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        12.6956 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        12.9243 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (16)
      WBls:0000101 10.0547 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        5.61417 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    GO_annotation: 00203337
      00203338
    Ortholog (68)
    Paralog (18)
    Structured_description: Automated_description: Predicted to enable glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of C. elegans sqv-6. In C. elegans, sqv-6 is involved in several processes, including UDP-D-xylose metabolic process; egg-laying behavior; and glycosaminoglycan biosynthetic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN01516
    Corresponding_CDS_history: CBN01516:np197
    Corresponding_transcript: CBN01516.1
    Other_sequence (44)
  Experimental_info: Microarray_results: GPL14142_CBN01516_165-224_0.780_111_A
      GPL14142_CBN01516_458-517_0.759_137_B
      GPL14142_CBN01516_544-603_0.807_68_C
  Method: Gene