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WormBase Tree Display for Gene: WBGene00139894

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Name Class

WBGene00139894SMapS_parentSequenceCbre_Contig3
IdentityVersion2
NameCGC_nameCbn-rcq-5From_analysisInferred_from_orthology
Sequence_nameCBN01169
Molecular_nameCBN01169
CBN01169.1
CN29052
Public_nameCbn-rcq-5
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:50WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-rcq-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrcq
RNASeq_FPKMWBls:0000002 (11)
WBls:0000004130.812From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
236.71From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
24.9145From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002410.2679From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
12.2072From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
8.05826From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
8.181From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
9.26479From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000385.32873From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
5.66122From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
5.99372From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (18)
WBls:000010119.3726From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
5.32873From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00203068
00203069
00203070
00203071
Ortholog (32)
ParalogWBGene00142353Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00190368Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00192776Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00193046Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00151609Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity; helicase activity; and nucleic acid binding activity. Predicted to be involved in DNA recombination. Is an ortholog of C. elegans rcq-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN01169
Corresponding_CDS_historyCBN01169:np197
Corresponding_transcriptCBN01169.1
Other_sequence (29)
Experimental_infoMicroarray_resultsGPL14142_CBN01169_858-917_0.828_81_B
GPL14142_CBN01169_1113-1172_0.825_84_C
GPL14142_CBN01169_1414-1473_0.860_59_A
MethodGene