WormBase Tree Display for Gene: WBGene00138810

WBGene00138810 SMap: S_parent: Sequence: Cbre_Contig165
  Identity: Version: 2
    Name: CGC_name: Cbn-gon-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN00085
      Molecular_name: CBN00085
        CBN00085.1
        CN09844
      Other_name: CBN00085
        Cbn-gon-1 From_analysis: Inferred_from_orthology
      Public_name: Cbn-gon-1.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-gon-1
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-gon-1.2
                Other_name: Cbn-gon-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gon
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.523665 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        1.04733 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 14.0232 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        15.2106 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        6.30318 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        7.68236 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        7.79894 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 4.30993 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        4.73044 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        5.15096 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 1.69514 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        1.80888 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00202168
      00202169
      00202170
      00202171
      00202172
    Ortholog (40)
    Paralog: WBGene00190254 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00139551 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00141125 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00141131 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00141247 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00149214 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00159412 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00162812 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00164810 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193533 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in extracellular matrix organization and proteolysis. Is an ortholog of C. elegans gon-1. In C. elegans, gon-1 is involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; muscle organ morphogenesis; and negative regulation of presynapse assembly. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN00085
    Corresponding_transcript: CBN00085.1
    Other_sequence: JI164015.1
      JI465217.1
      Dviv_isotig32909
      MP00069
      MPC00795_1
      Oden_isotig19638
  Experimental_info: Microarray_results: GPL14142_CBN00085_6186-6245_0.921_18_B
      GPL14142_CBN00085_6387-6446_0.937_11_A
      GPL14142_CBN28289_4785-4844_0.928_4_B
      GPL14142_CBN28289_4791-4850_0.922_5_C
      GPL14142_CBN28289_4835-4894_0.944_2_A
  Method: Gene