WormBase Tree Display for Gene: WBGene00137488

WBGene00137488 SMap: S_parent: Sequence: Cjap.Contig17563
  Identity: Version: 3
    Name: CGC_name: Cjp-che-12 From_analysis: Inferred_from_orthology
      Sequence_name: CJA18284
      Molecular_name: CJA18284
        CJA18284.1
        JA51603
      Public_name: Cjp-che-12
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cjp-che-12
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: che
    RNASeq_FPKM: WBls:0000004 3.78617 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 3.33748 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0.867406 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        0.869464 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        0.871521 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.20213 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.569481 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        0.59316 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        0.670504 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.681192 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        0.743918 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.817331 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.823616 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        0.882915 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        0.890397 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 0.823616 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        1.10093 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (33)
    Paralog: WBGene00124863 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00129287 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00132965 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135049 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00206759 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00207297 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00213703 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00217153 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00217672 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: CLASP N-terminal domain; TOG domain; Armadillo-type fold; CLASP N terminal; and Armadillo-like helical. Is an ortholog of C. elegans che-12. In C. elegans, che-12 is involved in several processes, including chemotaxis; cilium assembly; and hyperosmotic response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA18284
    Corresponding_transcript: CJA18284.1
    Other_sequence: JO472975.1
      JI167894.1
      JI220115.1
      Dviv_isotig24781
      Acan_isotig10962
      JI466984.1
  Experimental_info: Expr_pattern: Expr1071977
      Expr1085138
    Microarray_results: GPL14145_CJA06050_1030-1089_0.886_22_C
      GPL14145_CJA06050_219-278_0.794_95_B
      GPL14145_CJA06050_813-872_0.866_40_A
      GPL14145_CJA18284_1829-1888_0.942_3_C
      GPL14145_CJA18284_1833-1892_0.944_2_B
      GPL14145_CJA18284_1984-2043_0.945_1_A
  Method: Gene