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WormBase Tree Display for Gene: WBGene00135899

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Name Class

WBGene00135899SMapS_parentSequenceCjap.Contig16415
IdentityVersion3
NameSequence_nameCJA16696
Molecular_nameCJA16696
CJA16696.1
JA54389
Public_nameCJA16696
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-daf-4
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
320 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000472.5972From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002730.5614From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000389.13802From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
9.43688From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
9.73575From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
WBls:000004123.125From_analysisRNASeq.japonica.WBls:0000041.control_median
31.4478From_analysisRNASeq.japonica.WBls:0000041.control_mean
3.14919From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
3.30668From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
3.418From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
41.0562From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
5.19377From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
63.2821From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
64.5262From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
67.6503From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
WBls:000010128.7396From_analysisRNASeq.japonica.total_over_all_stages.control_mean
9.73575From_analysisRNASeq.japonica.total_over_all_stages.control_median
GO_annotation00199939
00199940
00199941
00199942
00199943
00199944
Ortholog (31)
ParalogWBGene00120136Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124607Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00184810Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218843Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and transmembrane receptor protein serine/threonine kinase activity. Predicted to be involved in transmembrane receptor protein serine/threonine kinase signaling pathway. Predicted to be located in membrane. Is an ortholog of C. elegans daf-4. In C. elegans, daf-4 is involved in several processes, including defense response to other organism; regulation of BMP signaling pathway; and regulation of anatomical structure morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA16696
Corresponding_transcriptCJA16696.1
Other_sequenceFE914774.1
MCC00202_1
ASC34509_1
MC01551
BXC00356_1
GP01559
Experimental_infoExpr_patternExpr1085408
Microarray_resultsGPL14145_CJA16696_280-339_0.822_52_B
GPL14145_CJA16696_348-407_0.563_233_A
GPL14145_CJA16696_653-712_0.873_19_C
Remark[180319 gw3] The CGC name Cjp-daf-4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene