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WormBase Tree Display for Gene: WBGene00135337

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Name Class

WBGene00135337SMapS_parentSequenceCjap.Contig1521
IdentityVersion3
NameCGC_nameCjp-aex-4From_analysisInferred_from_orthology
Sequence_nameCJA16133
Molecular_nameCJA16133a
CJA16133a.1
JA47909
CJA16133b
JA59076
CJA16133b.1
Other_nameCjp-tag-81From_analysisInferred_from_orthology
Public_nameCjp-aex-4
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-tag-81
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
320 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCjp-aex-4
Other_nameCjp-tag-81
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classaex
RNASeq_FPKMWBls:00000042.58619From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000276.12715From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000383.08892From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
3.6099From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
4.13088From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000411.91884From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
1.93143From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
1.98451From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
2.05988From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
2.18341From_analysisRNASeq.japonica.WBls:0000041.control_median
2.30694From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2.50361From_analysisRNASeq.japonica.WBls:0000041.control_mean
2.54216From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
3.4596From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
3.82549From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
WBls:00001012.54216From_analysisRNASeq.japonica.total_over_all_stages.control_median
2.76631From_analysisRNASeq.japonica.total_over_all_stages.control_mean
Ortholog (28)
ParalogWBGene00121455Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00210349Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: Target SNARE coiled-coil homology domain. Is an ortholog of C. elegans aex-4. In C. elegans, aex-4 is involved in positive regulation of defecation and positive regulation of protein secretion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA16133a
CJA16133b
Corresponding_transcriptCJA16133a.1
CJA16133b.1
Other_sequenceOden_isotig21081
Name_isotig01189
Experimental_infoExpr_patternExpr1073992
Microarray_resultsGPL14145_CJA16133_153-212_0.898_7_B
GPL14145_CJA16133_432-491_0.958_1_C
GPL14145_CJA16133_515-574_0.953_2_A
MethodGene