WormBase Tree Display for Gene: WBGene00135133

WBGene00135133 SMap: S_parent: Sequence: Cjap.Contig17620
  Identity: Version: 9
    Name: CGC_name: Cjp-ears-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA15929
      Molecular_name: CJA15929a
        CJA15929a.1
        JA41444
        CJA15929b
        JA46390
        CJA15929b.1
      Other_name: Cjp-ers-2 From_analysis: Inferred_from_orthology
      Public_name: Cjp-ears-1.2
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-ers-2
        2 15 Feb 2010 11:25:56 WBPerson4055 Name_change: CGC_name: Cjp-ears-2
                Other_name: Cjp-ers-2
        3 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        4 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
        5 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Cjp-ears-1.2
        6 08 May 2019 10:09:28 WBPerson1983 Name_change: CGC_name: Removed
        7 27 Nov 2019 12:48:14 WBPerson1983 Name_change: CGC_name: Cjp-ears-1.2
        8 04 Feb 2020 15:43:57 WBPerson1983 Name_change: CGC_name: Removed
        9 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Cjp-ears-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ears
    RNASeq_FPKM: WBls:0000004 59.9713 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 110.078 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 103.75 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        96.1247 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        99.9373 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
      WBls:0000041 123.312 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        35.2012 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        36.4346 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        40.036 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        63.0959 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        63.9446 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        64.5224 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        65.1002 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        66.7752 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        73.9633 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
      WBls:0000101 65.1002 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        67.2839 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00199344
      00199345
      00199346
      00199347
      00199348
      00199349
    Ortholog (30)
    Paralog: WBGene00127258 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133759 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00214668 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity and aminoacyl-tRNA ligase activity. Predicted to be involved in tRNA aminoacylation for protein translation. Predicted to be located in cytoplasm. Is an ortholog of C. elegans ears-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA15929a
      CJA15929b
    Corresponding_transcript: CJA15929a.1
      CJA15929b.1
    Other_sequence (57)
  Experimental_info: Expr_pattern: Expr1085196
    Microarray_results: GPL14145_CJA15929_3387-3446_0.934_3_C
      GPL14145_CJA15929_3560-3619_0.939_2_B
      GPL14145_CJA15929_3574-3633_0.948_1_A
  Remark: [180319 gw3] The CGC name Cjp-ears-2 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00127258 Curator_confirmed: WBPerson4025
    [190507 pad] The CGC name Cjp-ears-1.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200204 pad] The CGC name Cjp-ears-1.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene