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WormBase Tree Display for Gene: WBGene00134743

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Name Class

WBGene00134743SMapS_parentSequenceCjap.Contig18184
IdentityVersion3
NameCGC_nameCjp-del-5From_analysisInferred_from_orthology
Sequence_nameCJA15539
Molecular_nameCJA15539
CJA15539.1
JA40789
Public_nameCjp-del-5
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedNGASP import
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
324 Feb 2012 15:38:17WBPerson2970Name_changeCGC_nameCjp-del-5
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdel
RNASeq_FPKMWBls:00000041.29397From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000273.20054From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000382.0458From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
2.30332From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
2.56084From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.758513From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
1.15759From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
1.36596From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
1.57125From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
1.65407From_analysisRNASeq.japonica.WBls:0000041.control_median
1.73689From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
1.774From_analysisRNASeq.japonica.WBls:0000041.control_mean
2.49896From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
2.5095From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
2.59335From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
WBls:00001011.73689From_analysisRNASeq.japonica.total_over_all_stages.control_median
1.79178From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00199060
00199061
00199062
OrthologWBGene00010334Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00037123Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00058370Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00148677Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g2536Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4112Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12181Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14445Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15910Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g10080Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1364Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g20668Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19658Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12070Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00599.g12643Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00599.g12644Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-del-5Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21939Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00025.g1460Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01211Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023691Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07375Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_X0080400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19989Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00121298Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124721Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127568Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128151Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00128895Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129991Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130401Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130892Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131211Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132275Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133346Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133560Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134090Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134155Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134317Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137581Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00137813Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212193Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00212440Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213590Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213730Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218895Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable sodium channel activity. Predicted to be involved in sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans del-5.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA15539
Corresponding_transcriptCJA15539.1
Experimental_infoExpr_patternExpr1079855
Microarray_resultsGPL14145_CJA15539_1663-1722_0.929_2_A
GPL14145_CJA15539_738-797_0.851_22_C
GPL14145_CJA15539_900-959_0.723_94_B
MethodGene