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WormBase Tree Display for Gene: WBGene00131875

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Name Class

WBGene00131875SMapS_parentSequenceCjap.Contig8406
IdentityVersion4
NameCGC_nameCjp-unc-47From_analysisInferred_from_orthology
Sequence_nameCJA12671
Molecular_nameCJA12671a
CJA12671a.1
JA63007
CJA12671b
JA52071
CJA12671b.1
Public_nameCjp-unc-47
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:22WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-unc-47
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
428 Jul 2021 11:12:27WBPerson1983Name_changeCGC_nameCjp-unc-47
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000042.27196From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.514336From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000381.82529From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
1.95265From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
2.08001From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.559859From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0.945112From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
1.34165From_analysisRNASeq.japonica.WBls:0000041.control_mean
1.4014From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
1.45606From_analysisRNASeq.japonica.WBls:0000041.control_median
1.51071From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
1.82521From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
2.03403From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
2.45689From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
WBls:00001011.34037From_analysisRNASeq.japonica.total_over_all_stages.control_mean
1.51071From_analysisRNASeq.japonica.total_over_all_stages.control_median
OrthologWBGene00156535Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00031320Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226131Brugia malayiFrom_analysisWormBase-Compara
WBGene00006783Caenorhabditis elegansFrom_analysisWormBase-Compara
CBOVI.g5282Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16367Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17494Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP29.g23252Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8831Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5920Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3817Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17863Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8062Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00298.g8759Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-47Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_00155.g5830Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19538Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009607Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08109Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22481Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30209100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00054935Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIII_pilon.g8813Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246397Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00261409Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286618Trichuris murisFrom_analysisWormBase-Compara
WBGene00290247Trichuris murisFrom_analysisWormBase-Compara
WBGene00290249Trichuris murisFrom_analysisWormBase-Compara
WBGene00290965Trichuris murisFrom_analysisWormBase-Compara
WBGene00301830Trichuris murisFrom_analysisWormBase-Compara
WBGene00301832Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00119431Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125563Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00127131Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129127Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00129337Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00131000Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132503Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133519Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133569Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00134886Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135531Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135963Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138323Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00207004Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00209485Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210808Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214555Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217985Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00219125Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans unc-47.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA12671a
CJA12671b
Corresponding_transcriptCJA12671a.1
CJA12671b.1
Other_sequenceAcan_isotig22437
RS09615
SSC00066_1
RSC00793_1
SS01731
JI178176.1
Remark[190208 pad] The CGC name Cjp-unc-47 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene