WormBase Tree Display for Gene: WBGene00129007

WBGene00129007 SMap: S_parent: Sequence: Cjap.Contig17793
  Identity: Version: 2
    Name: CGC_name: Cjp-hsf-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA09803
      Molecular_name: CJA09803
        CJA09803.1
        JA62903
      Public_name: Cjp-hsf-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-hsf-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hsf
    RNASeq_FPKM: WBls:0000004 24.8677 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 20.1501 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 8.99077 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        9.41982 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        9.84888 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 10.5405 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        23.5618 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        27.7808 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        36.5831 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        48.4808 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        49.1439 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        50.284 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        8.80998 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        9.1356 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        9.26863 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
      WBls:0000101 10.5405 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        22.008 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog: WBGene00002004 Caenorhabditis elegans From_analysis: Inparanoid_8
      WBGene00038076 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00055962 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00160306 Caenorhabditis brenneri From_analysis: Inparanoid_8
      CSP39.g28616 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      FL83_09264 Caenorhabditis latens From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Heat shock transcription factor family and Heat shock factor protein 2. Is an ortholog of C. elegans hsf-1. In C. elegans, hsf-1 is involved in several processes, including ascaroside biosynthetic process; defense response to other organism; and positive regulation of metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA09803
    Corresponding_transcript: CJA09803.1
    Other_sequence (18)
  Experimental_info: Expr_pattern: Expr1082087
    Microarray_results: GPL14145_CJA09803_1158-1217_0.888_10_A
      GPL14145_CJA09803_1184-1243_0.924_3_C
      GPL14145_CJA09803_1231-1290_0.795_55_B
  Method: Gene