WormBase Tree Display for Gene: WBGene00125220

WBGene00125220 SMap: S_parent: Sequence: Cjap.Contig17748
  Identity: Version: 3
    Name: Sequence_name: CJA06016
      Molecular_name: CJA06016
        CJA06016.1
        JA45157
        CJA06016.2
        CJA06016.3
      Public_name: CJA06016
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-nhr-230
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000004 5.94513 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 9.72911 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 2.97058 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        3.64606 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        4.32155 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.990903 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        1.05071 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.22157 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.62463 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        1.64253 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        1.66044 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.76005 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.96067 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        2.0885 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        3.48295 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
      WBls:0000101 1.96067 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        2.84975 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00191478
      00191479
      00191480
      00191481
    Ortholog (19)
    Paralog (105)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-230. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA06016
    Corresponding_transcript: CJA06016.1
      CJA06016.2
      CJA06016.3
    Other_sequence: CRC12055_1
      MHC11359_1
  Experimental_info: Expr_pattern: Expr1075211
    Microarray_results: GPL14145_CJA06016_2-61_0.918_3_C
      GPL14145_CJA06016_224-283_0.945_2_B
      GPL14145_CJA06016_308-367_0.964_1_A
  Remark: [180319 gw3] The CGC name Cjp-nhr-230 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene