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WormBase Tree Display for Gene: WBGene00118328

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Name Class

WBGene00118328SMapS_parentSequencePPA_ChrX
IdentityVersion1
NameSequence_namePPA28774
Molecular_namePPA28774
PPA28774.1
PP63604
Other_nameGENEPREDICTION_SNAP300000085566
UMM-S2845-23.75Person_evidenceWBPerson606
Public_namePPA28774
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:07WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00186276
00186277
00186278
Ortholog (72)
ParalogWBGene00093955Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00098490Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111008Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00111009Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00100627Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111006Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280731Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280781Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280829Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable lysozyme activity. Predicted to be involved in cell wall macromolecule catabolic process and peptidoglycan catabolic process. Is an ortholog of C. elegans lys-10; lys-5; and lys-6. In C. elegans, lys-5 is involved in defense response to Gram-positive bacterium.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA28774
Corresponding_transcriptPPA28774.1
Experimental_infoMicroarray_resultsGPL14372_Probes_22794
MethodGene