WormBase Tree Display for Gene: WBGene00100627

WBGene00100627 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 2
    Name: CGC_name: Ppa-lys-3 From_analysis: Inferred_from_orthology
      Sequence_name: PPA11073
      Molecular_name: PPA11073
        PPA11073.1
        PP62437
      Other_name: GENEPREDICTION_SNAP300000067993
        UMS-S13-35.11 Person_evidence: WBPerson606
      Public_name: Ppa-lys-3
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 28 Jul 2021 11:12:26 WBPerson1983 Name_change: CGC_name: Ppa-lys-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lys
    RNASeq_FPKM: WBls:0000032 4.58264 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 10.0503 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        4.58264 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        4.87765 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    Ortholog (23)
    Paralog: WBGene00093955 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111006 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111008 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111009 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00118328 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280731 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280781 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280829 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: Glycoside hydrolase superfamily. Is an ortholog of C. elegans lys-3. In C. elegans, lys-3 is involved in stress response to copper ion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA11073
    Corresponding_transcript: PPA11073.1
    Other_sequence (92)
  Experimental_info: Microarray_results: GPL14372_Probes_56468
      GPL14372_Probes_56469
      GPL14372_Probes_56470
      GPL14372_Probes_56471
      GPL14372_Probes_56473
      GPL14372_Probes_56474
      GPL14372_Probes_56475
    Expression_cluster: WBPaper00041207:PP_dauer_down
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene