WormBase Tree Display for Gene: WBGene00115036
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| WBGene00115036 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 8 | |||||||
| Name | Sequence_name | PPA25482 | |||||||
| Molecular_name | PPA25482 | ||||||||
| PPA25482.1 | |||||||||
| PP65379 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000082337 | ||||||||
| GENEPREDICTION_SNAP300000082339 | |||||||||
| GENEPREDICTION_SNAP300000082340 | |||||||||
| UMM-S442-2.104 | Person_evidence | WBPerson606 | |||||||
| Ppa-exos-9 | From_analysis | Inferred_from_orthology | |||||||
| Public_name | PPA25482 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00115038 | ||||
| 3 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00115039 | ||||
| 4 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-rps-28 | ||||
| Other_name | Ppa-exos-9 | ||||||||
| 5 | 08 May 2019 10:09:27 | WBPerson1983 | Name_change | CGC_name | Ppa-rps-28.1 | ||||
| Other_name | Ppa-rps-28 | ||||||||
| 6 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-rps-28 | ||||
| 8 | 28 Jul 2021 11:12:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00115038 | ||||||||
| WBGene00115039 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 32.806 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 22.5892 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 32.806 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 34.9617 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00184851 | ||||||||
| 00184852 | |||||||||
| 00184853 | |||||||||
| 00184854 | |||||||||
| 00184855 | |||||||||
| Ortholog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable unfolded protein binding activity. Predicted to be involved in protein folding and tRNA wobble uridine modification. Predicted to be part of elongator holoenzyme complex and prefoldin complex. Is an ortholog of C. elegans elpc-2 and rps-28. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA25482 | |||||||
| Corresponding_transcript | PPA25482.1 | ||||||||
| Other_sequence (47) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_42313 | |||||||
| GPL14372_Probes_42314 | |||||||||
| GPL14372_Probes_42316 | |||||||||
| GPL14372_Probes_42317 | |||||||||
| GPL14372_Probes_42318 | |||||||||
| GPL14372_Probes_42319 | |||||||||
| GPL14372_Probes_42325 | |||||||||
| GPL14372_Probes_42326 | |||||||||
| GPL14372_Probes_42327 | |||||||||
| GPL14372_Probes_42329 | |||||||||
| Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
| Remark | [191001 pad] The CGC name Ppa-rps-28.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210728 pad] The CGC name Ppa-rps-28 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
