WormBase Tree Display for Gene: WBGene00113962
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WBGene00113962 | SMap | S_parent | Sequence | PPA_ChrV | ||
---|---|---|---|---|---|---|
Identity | Version | 5 | ||||
Name | CGC_name | Ppa-drag-1 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA24408 | |||||
Molecular_name | PPA24408 | |||||
PPA24408.1 | ||||||
PP69218 | ||||||
Other_name | GENEPREDICTION_SNAP300000081292 | |||||
UMM-S13-83.27 | Person_evidence | WBPerson606 | ||||
Public_name | Ppa-drag-1 | |||||
Species | Pristionchus pacificus | |||||
History | Version_change (5) | |||||
Acquires_merge | WBGene00205849 | |||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | drag | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||
RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
Ortholog (27) | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Repulsive guidance molecule, C-terminal; Repulsive guidance molecule, N-terminal; Mog1/PsbP, alpha/beta/alpha sandwich; Repulsive guidance molecule; Repulsive guidance molecule (RGM) C-terminus; and Repulsive guidance molecule (RGM) N-terminus. Is an ortholog of C. elegans drag-1. In C. elegans, drag-1 is involved in several processes, including mesodermal cell fate specification; regulation of BMP signaling pathway; and regulation of dauer larval development. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed (2) | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA24408 | ||||
Corresponding_transcript | PPA24408.1 | |||||
Other_sequence | PPC13396_1 | |||||
Experimental_info | Microarray_results | GPL14372_Probes_57134 | ||||
GPL14372_Probes_57135 | ||||||
Remark | [180319 gw3] The CGC name Ppa-drag-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | |||
Method | Gene |