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WormBase Tree Display for Gene: WBGene00112452

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Name Class

WBGene00112452SMapS_parentSequencePPA_ChrV
IdentityVersion6
NameSequence_namePPA22898
Molecular_namePPA22898
PPA22898.1
PP55277
Other_nameGENEPREDICTION_SNAP300000081496
UMM-S289-8.17Person_evidenceWBPerson606
Public_namePPA22898
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:06WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00203252
308 Feb 2019 15:42:27WBPerson1983Name_changeCGC_namePpa-skr-4.1
408 May 2019 10:09:28WBPerson1983Name_changeCGC_nameRemoved
528 May 2021 19:05:19WBPerson1983Name_changeCGC_namePpa-skr-4.1
628 Jul 2021 11:12:30WBPerson1983Name_changeCGC_nameRemoved
Acquires_mergeWBGene00203252
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000327.2177From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
2.4059From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00183736
OrthologWBGene00004810Caenorhabditis elegansFrom_analysisOMA
WBGene00246295Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g11746Caenorhabditis bovisFrom_analysisWormBase-Compara
Pan_g21634Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00258939Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285691Trichuris murisFrom_analysisWormBase-Compara
Paralog (21)
Structured_descriptionAutomated_descriptionPredicted to be involved in ubiquitin-dependent protein catabolic process. Is an ortholog of C. elegans skr-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA22898
Corresponding_transcriptPPA22898.1
Experimental_infoMicroarray_resultsGPL14372_Probes_83653
GPL14372_Probes_83654
GPL14372_Probes_83655
GPL14372_Probes_83656
GPL14372_Probes_83657
Remark[190507 pad] The CGC name Ppa-skr-4.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210728 pad] The CGC name Ppa-skr-4.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene