WormBase Tree Display for Gene: WBGene00107017
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| WBGene00107017 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | CGC_name | Ppa-prx-3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA17463 | ||||||||
| Molecular_name | PPA17463 | ||||||||
| PPA17463.1 | |||||||||
| PP53422 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000074158 | ||||||||
| GENEPREDICTION_SNAP300000074160 | |||||||||
| UMM-S139-19.25 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-prx-3 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-prx-3 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00107019 | ||||
| 4 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| 5 | 08 Feb 2019 15:42:26 | WBPerson1983 | Name_change | CGC_name | Ppa-prx-3 | ||||
| 6 | 08 May 2019 10:09:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-prx-3 | ||||
| Acquires_merge | WBGene00107019 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | prx | ||||||||
| RNASeq_FPKM | WBls:0000032 | 12.0899 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 12.0899 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 13.0725 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 27.1275 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00181088 | ||||||||
| 00181089 | |||||||||
| 00181090 | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in peroxisome organization. Predicted to be located in peroxisomal membrane. Predicted to be part of small-subunit processome. Is an ortholog of C. elegans prx-3. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA17463 | |||||||
| Corresponding_transcript | PPA17463.1 | ||||||||
| Other_sequence | PPC17241_1 | ||||||||
| Oden_isotig10567 | |||||||||
| CJC03458_1 | |||||||||
| CR08385 | |||||||||
| CJC01703_1 | |||||||||
| CRC00430_1 | |||||||||
| Oden_isotig10565 | |||||||||
| PPC19333_1 | |||||||||
| Oden_isotig10568 | |||||||||
| Oden_isotig10566 | |||||||||
| Experimental_info | Microarray_results (11) | ||||||||
| Expression_cluster | WBPaper00041466:PP_germline-ablation_regulated | ||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-prx-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| [190507 pad] The CGC name Ppa-prx-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
