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WormBase Tree Display for Gene: WBGene00103615

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Name Class

WBGene00103615SMapS_parentSequencePPA_ChrI
IdentityVersion2
NameCGC_namePpa-dpy-30From_analysisInferred_from_orthology
Sequence_namePPA14061
Molecular_namePPA14061
PPA14061.1
PP16316
Other_nameGENEPREDICTION_SNAP300000070858
UMM-S71-17.56Person_evidenceWBPerson606
Public_namePpa-dpy-30
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_namePpa-dpy-30
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:0000032144.572From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:0000101118.276From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
87.616From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00179522
Ortholog (29)
ParalogWBGene00091305Pristionchus pacificusFrom_analysisInparanoid_8
Structured_descriptionAutomated_descriptionPredicted to be part of Set1C/COMPASS complex. Is an ortholog of C. elegans dpy-30. In C. elegans, dpy-30 is involved in several processes, including dosage compensation by hypoactivation of X chromosome; nematode male tail tip morphogenesis; and transdifferentiation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA14061
Corresponding_transcriptPPA14061.1
Other_sequence (36)
Experimental_infoMicroarray_resultsGPL14372_Probes_49883
GPL14372_Probes_49884
GPL14372_Probes_49885
GPL14372_Probes_49886
Expression_clusterWBPaper00041207:PP_dauer_up
WBPaper00041466:PP_germline-ablation_regulated
WBPaper00041606:PP_X.nematophila_regulated
WBPaper00045473:PP_Germline_Conserved_Operon
MethodGene