WormBase Tree Display for Gene: WBGene00094763
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WBGene00094763 | SMap | S_parent | Sequence | PPA_ChrV | ||
---|---|---|---|---|---|---|
Identity | Version | 10 | ||||
Name | Sequence_name | PPA05209 | ||||
Molecular_name | PPA05209 | |||||
PPA05209.1 | ||||||
PP64091 | ||||||
Other_name | GENEPREDICTION_SNAP300000061670 | |||||
GENEPREDICTION_SNAP300000069627 | ||||||
GENEPREDICTION_SNAP300000069630 | ||||||
GENEPREDICTION_SNAP300000069632 | ||||||
GENEPREDICTION_SNAP300000069635 | ||||||
GENEPREDICTION_SNAP300000072217 | ||||||
GENEPREDICTION_SNAP300000086451 | ||||||
UMM-S60-7.37 | Person_evidence | WBPerson606 | ||||
Public_name | PPA05209 | |||||
Species | Pristionchus pacificus | |||||
History | Version_change (10) | |||||
Acquires_merge | WBGene00102711 | |||||
WBGene00105021 | ||||||
WBGene00102703 | ||||||
WBGene00102706 | ||||||
WBGene00102708 | ||||||
WBGene00117588 | ||||||
WBGene00202657 | ||||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
RNASeq_FPKM | WBls:0000032 | 1.90526 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 1.90526 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||
2.21834 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||
4.74975 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
Ortholog (147) | ||||||
Paralog (58) | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; C-type lectin fold; Zinc finger C2H2 superfamily; Spermadhesin, CUB domain superfamily; Lectin C-type domain; Zinc finger C2H2-type; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Is an ortholog of C. elegans gcy-36 and scrt-1 and members of the C. elegans clec gene class including clec-41. In C. elegans, gcy-36 is involved in feeding behavior and response to oxygen levels. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA05209 | ||||
Corresponding_transcript | PPA05209.1 | |||||
Other_sequence (17) | ||||||
Experimental_info | Microarray_results (24) | |||||
Expression_cluster | WBPaper00041207:PP_dauer_down | |||||
WBPaper00041466:PP_germline-ablation_regulated | ||||||
WBPaper00041606:PP_S.marcescens_regulated | ||||||
WBPaper00041606:PP_X.nematophila_regulated | ||||||
Remark | [180319 gw3] The CGC name Ppa-scrt-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | |||
Method | Gene |