WormBase Tree Display for Gene: WBGene00093127
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WBGene00093127 | SMap | S_parent | Sequence | PPA_ChrV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Ppa-strl-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA03573 | ||||||||
Molecular_name | PPA03573 | ||||||||
PPA03573.1 | |||||||||
PP45164 | |||||||||
Other_name | GENEPREDICTION_SNAP300000059917 | ||||||||
UMM-S60-47.43 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-strl-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-strl-1.1 | ||||
3 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:27 | WBPerson1983 | Name_change | CGC_name | Ppa-strl-1.1 | ||||
5 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-strl-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | strl | ||||||||
RNASeq_FPKM | WBls:0000032 | 3.33486 | From_analysis (3) | ||||||
WBls:0000101 | 2.86197 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
3.33486 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
5.25106 | From_analysis (3) | ||||||||
GO_annotation | 00174919 | ||||||||
00174920 | |||||||||
00174921 | |||||||||
00174922 | |||||||||
00174923 | |||||||||
00174924 | |||||||||
00174925 | |||||||||
Ortholog (32) | |||||||||
Paralog | WBGene00090155 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00094734 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00098789 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00113775 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00206094 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00273691 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00275722 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00279741 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00283501 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable chitin binding activity; cholesterol binding activity; and cholesterol transfer activity. Predicted to be involved in steroid biosynthetic process. Predicted to be located in extracellular region and mitochondrion. Is an ortholog of C. elegans strl-1. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA03573 | |||||||
Corresponding_transcript | PPA03573.1 | ||||||||
Other_sequence (12) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_87521 | |||||||
GPL14372_Probes_87522 | |||||||||
GPL14372_Probes_87523 | |||||||||
GPL14372_Probes_87524 | |||||||||
GPL14372_Probes_87529 | |||||||||
Expression_cluster | WBPaper00041606:PP_S.marcescens_regulated | ||||||||
Remark | [190208 pad] The CGC name Ppa-strl-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-strl-1.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |