WormBase Tree Display for Gene: WBGene00092096
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| WBGene00092096 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-nmad-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA02542 | ||||||||
| Molecular_name | PPA02542 | ||||||||
| PPA02542.1 | |||||||||
| PP27446 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000060203 | ||||||||
| UMM-S50-5.66 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-nmad-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-nmad-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nmad | ||||||||
| RNASeq_FPKM | WBls:0000032 | 117.193 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 64.0591 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 74.9842 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00174324 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in demethylation. Is an ortholog of C. elegans nmad-1. In C. elegans, nmad-1 is involved in several processes, including meiotic chromosome condensation; positive regulation of double-strand break repair; and positive regulation of reproductive process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA02542 | |||||||
| Corresponding_transcript | PPA02542.1 | ||||||||
| Other_sequence (41) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_41661 | |||||||
| GPL14372_Probes_41662 | |||||||||
| GPL14372_Probes_41663 | |||||||||
| GPL14372_Probes_41664 | |||||||||
| GPL14372_Probes_41665 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Method | Gene |
