WormBase Tree Display for Gene: WBGene00089871

WBGene00089871 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 3
    Name: CGC_name: Ppa-agmo-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA00317
      Molecular_name: PPA00317
        PPA00317.1
        PP68687
      Other_name: GENEPREDICTION_SNAP300000057447
        GENEPREDICTION_SNAP300000057449
        UMM-S57-37.32 Person_evidence: WBPerson606
      Public_name: Ppa-agmo-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:48 WBPerson4055 Event: Acquires_merge: WBGene00089873
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-agmo-1
      Acquires_merge: WBGene00089873
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: agmo
    RNASeq_FPKM: WBls:0000032 25.7238 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 10.3616 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        5.36104 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00173197
      00173198
      00173199
    Ortholog (13)
    Paralog: WBGene00105030 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00097213 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102743 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable iron ion binding activity and oxidoreductase activity. Predicted to be involved in lipid biosynthetic process. Is an ortholog of C. elegans agmo-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA00317
    Corresponding_transcript: PPA00317.1
    Other_sequence: FE912987.1
      JI179926.1
      ASC25741_1
      AS01571
      PPC20869_1
      FE913615.1
  Experimental_info: Microarray_results: GPL14372_Probes_55440
      GPL14372_Probes_55441
      GPL14372_Probes_55442
      GPL14372_Probes_55443
      GPL14372_Probes_55444
      GPL14372_Probes_55445
      GPL14372_Probes_55446
      GPL14372_Probes_55447
      GPL14372_Probes_55448
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene