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WormBase Tree Display for Gene: WBGene00089796

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Name Class

WBGene00089796SMapS_parentSequencePPA_ChrI
IdentityVersion1
NameCGC_namePpa-pix-1From_analysisInferred_from_orthology
Sequence_namePPA00242
Molecular_namePPA00242
PPA00242.1
PP53979
Other_nameGENEPREDICTION_SNAP300000057372
UMM-S57-32.54Person_evidenceWBPerson606
Public_namePpa-pix-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:03WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpix
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.749487From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
2.24846From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00173157
Ortholog (30)
ParalogWBGene00090011Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00090599Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00100026Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103518Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00111213Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans pix-1. In C. elegans, pix-1 is involved in gonad morphogenesis; inductive cell migration; and neuron migration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA00242
Corresponding_transcriptPPA00242.1
Other_sequenceGO249807.1
JI168838.1
Experimental_infoMicroarray_resultsGPL14372_Probes_55307
GPL14372_Probes_55308
GPL14372_Probes_55309
MethodGene