WormBase Tree Display for Gene: WBGene00088435

WBGene00088435 SMap: S_parent: Sequence: cb25.fpc4470
  Identity: Version: 5
    Name: CGC_name: Cbr-clec-222 From_analysis: Inferred_from_orthology
      Sequence_name: CBG27021
      Molecular_name: CBG27021
        CBG27021.1
        CBP36965
      Other_name: CBG_27021 Accession_evidence: NDB HE601533
      Public_name: CBG27021
    DB_info: Database: NDB locus_tag CBG_27021
    Species: Caenorhabditis briggsae
    History: Version_change: 1 23 Jul 2008 11:20:50 WBPerson1847 Event: Imported: nGASP new gene
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbr-clec-222
        3 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Removed
        4 04 Feb 2020 15:43:56 WBPerson1983 Name_change: CGC_name: Cbr-clec-222
        5 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Removed
        6 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cbr-clec-222
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    RNASeq_FPKM: WBls:0000002 10.0952 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        14.0516 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        24.9977 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        7.06197 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        17.5464 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        21.3787 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        43.3599 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
        0.027594 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        0.137969 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
      WBls:0000024 0 From_analysis (11)
        0.548537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000024.Hermaphrodite.WBbt:0007833.SRP026198.SRX311789
      WBls:0000027 0 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
            RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
      WBls:0000035 0 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
            RNASeq.briggsae.WBls:0000038.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
            RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
      WBls:0000041 0.30929 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        20.2741 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        27.746 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        28.6423 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        35.2179 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        58.7679 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.932975 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        11.1211 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        19.5784 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        1.96811 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        6.49559 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        7.26204 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        7.6308 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        8.36694 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        9.21816 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        27.3916 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        7.99887 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        9.97826 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 0 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        6.52421 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        6.92086 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (20)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily and C-type lectin fold. Is an ortholog of C. elegans clec-222. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG27021
    Corresponding_transcript: CBG27021.1
  Experimental_info: Expr_pattern: Expr1060641
    Microarray_results: GPL14143_CBG27021_704-763_0.712_53_A
  Remark: [191001 pad] The CGC name Cbr-clec-222 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [200603 pad] The CGC name Cbr-clec-222 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene