WormBase Tree Display for Gene: WBGene00086991

WBGene00086991 SMap: S_parent: Sequence: cb25.fpc0058
  Identity: Version: 3
    Name: CGC_name: Cbr-nbs-1 From_analysis: Inferred_from_orthology
      Sequence_name: CBG25577
      Molecular_name: CBG25577
        CBG25577.1
        CBP38668
      Other_name: CBG_25577 Accession_evidence: NDB HE601438
        CBG_29110
      Public_name: Cbr-nbs-1
    DB_info: Database: NDB locus_tag CBG_25577
    Species: Caenorhabditis briggsae
    History: Version_change: 1 23 Jul 2008 11:20:50 WBPerson1847 Event: Imported: nGASP new gene
        2 31 Aug 2016 10:29:43 WBPerson4025 Event: Acquires_merge: WBGene00195074
        3 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Cbr-nbs-1
        4 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Cbr-nbs-1
      Acquires_merge: WBGene00195074
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nbs
    RNASeq_FPKM: WBls:0000002 12.7001 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        16.2572 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        16.6263 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        19.4451 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        17.6472 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        18.0357 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        21.8171 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 13.3583 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
        14.2872 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        15.2162 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        14.4321 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        14.7218 From_analysis: RNASeq.briggsae.WBls:0000003.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 7.06905 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        7.54066 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        8.01226 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
            RNASeq.briggsae.WBls:0000004.control_median
        10.5002 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        7.82491 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        8.53662 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        9.27669 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 1.08389 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        1.6781 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        3.76382 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        8.52947 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        1.89512 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        2.11213 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        3.3509 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 5.66773 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 18.7501 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
        4.79988 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        5.6744 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        6.20585 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        6.73731 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        8.99042 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
      WBls:0000041 17.1546 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        25.1847 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        25.497 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        26.5042 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        27.5113 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        30.576 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        25.6182 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        26.5648 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        26.7638 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        34.2255 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 12.5411 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        14.5635 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        14.9887 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        18.1903 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        19.3692 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        36.5622 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
        16.0393 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        17.0899 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
        18.9893 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
      WBls:0000101 12.5411 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        12.604 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        12.6206 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        13.3869 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    Ortholog (18)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: SMAD/FHA domain superfamily; FHA domain; and Forkhead-associated (FHA) domain. Is an ortholog of C. elegans nbs-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG25577
    Corresponding_CDS_history: CBG25577:bp255
    Corresponding_transcript: CBG25577.1
    Other_sequence: CGC00691_1
      CR05853
      CRC06501_1
  Experimental_info: Expr_pattern: Expr1055483
    Microarray_results: GPL8303_CB6_WBGene00025927_B
      GPL14143_CBG25577_6-65_0.920_7_B
      GPL14143_CBG25577_61-120_0.927_1_C
      GPL14143_CBG25577_154-213_0.927_2_A
  Remark: [210528 pad] The CGC name Cbr-nbs-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene