WormBase Tree Display for Gene: WBGene00086569
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| WBGene00086569 | SMap | S_parent | Sequence | F38A6 | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | F38A6.5 | ||||||
| Molecular_name | F38A6.5 | |||||||
| F38A6.5.1 | ||||||||
| CE42915 | ||||||||
| Other_name | CELE_F38A6.5 | Accession_evidence | NDB | BX284605 | ||||
| Public_name | F38A6.5 | |||||||
| DB_info | Database | WormFlux | gene | WBGene00086569 | ||||
| NDB | locus_tag | CELE_F38A6.5 | ||||||
| Panther | gene | CAEEL|WormBase=WBGene00086569|UniProtKB=B5BM45 | ||||||
| family | PTHR21453 | |||||||
| NCBI | gene | 7040128 | ||||||
| RefSeq | protein | NM_001136424.2 | ||||||
| TrEMBL | UniProtAcc | B5BM45 | ||||||
| UniProt_GCRP | UniProtAcc | B5BM45 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 18 Jul 2008 16:14:48 | WBPerson4025 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001217 | ||||||
| Allele (37) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Ortholog (22) | ||||||||
| Paralog (81) | ||||||||
| Structured_description | Automated_description | Enriched in OLL; PVD; body wall muscle cell; and head mesodermal cell based on tiling array and RNA-seq studies. Is affected by several genes including glp-1; daf-12; and sek-1 based on RNA-seq and proteomic studies. Is affected by eight chemicals including rotenone; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Uncharacterised protein family UPF0376; Domain of unknown function DUF19; and Domain of unknown function (DUF19). | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_CDS | F38A6.5 | ||||||
| Corresponding_transcript | F38A6.5.1 | |||||||
| Other_sequence | CSC00233_1 | |||||||
| CBC08303_1 | ||||||||
| CJC06629_1 | ||||||||
| FD514999.1 | ||||||||
| FD516982.1 | ||||||||
| FD517426.1 | ||||||||
| Experimental_info | Expr_pattern | Expr1018383 | ||||||
| Expr1040421 | ||||||||
| Expr1150558 | ||||||||
| Expr2003462 | ||||||||
| Expr2021677 | ||||||||
| Microarray_results | GPL14144_F38A6.5_134-193_0.920_9_B | |||||||
| GPL14144_F38A6.5_260-319_0.937_3_A | ||||||||
| GPL14144_F38A6.5_51-110_0.834_35_C | ||||||||
| GPL19516_CGZ0020376 | ||||||||
| GPL21109_F38A6.5 | ||||||||
| Expression_cluster (48) | ||||||||
| Map_info | Positive | Positive_clone | F38A6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | V | 25.1661 | ||||||
| Reference | WBPaper00064216 | |||||||
| Method | Gene |
