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WormBase Tree Display for Gene: WBGene00082404

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Name Class

WBGene00082404SMapS_parentSequenceCrem_Contig3
IdentityVersion2
NameCGC_nameCre-bir-1.1From_analysisInferred_from_orthology
Sequence_nameCRE18637
Molecular_nameCRE18637
CRE18637.1
RP30851
Public_nameCre-bir-1.1
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:54WBPerson4055EventCreated
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-bir-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbir
RNASeq_FPKMWBls:00000048.8844From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
9.33734From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
9.79028From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (49)
WBls:00000270.1084From_analysisRNASeq.remanei.WBls:0000027.control_mean
0.433601From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
RNASeq.remanei.WBls:0000027.control_median
WBls:00000380.268344From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
0.892821From_analysisRNASeq.remanei.WBls:0000038.control_mean
0.93307From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
1.47705From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:0000041105.378From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
114.812From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
18.3451From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
20.4834From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
20.9356From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
54.1274From_analysisRNASeq.remanei.WBls:0000041.control_median
61.2122From_analysisRNASeq.remanei.WBls:0000041.control_mean
87.3193From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:000010117.7719From_analysisRNASeq.remanei.total_over_all_stages.control_mean
4.60209From_analysisRNASeq.remanei.total_over_all_stages.control_median
Ortholog (22)
ParalogWBGene00052327Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00052825Caenorhabditis remaneiFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00082406Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Inhibitor of Apoptosis domain and BIR repeat. Is an ortholog of C. elegans bir-1. In C. elegans, bir-1 is involved in several processes, including chromosome organization; egg-laying behavior; and inductive cell migration.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE18637
Corresponding_transcriptCRE18637.1
Experimental_infoExpr_patternExpr1110398
Microarray_resultsGPL14146_CRE18637_205-264_0.933_4_A
GPL14146_CRE18637_256-315_0.945_2_B
GPL14146_CRE18637_65-124_0.887_10_C
MethodGene