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WormBase Tree Display for Gene: WBGene00079829

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Name Class

WBGene00079829SMapS_parentSequenceCrem_Contig16
IdentityVersion2
NameCGC_nameCre-nkb-1From_analysisInferred_from_orthology
Sequence_nameCRE08143
Molecular_nameCRE08143
CRE08143.1
RP38278
Public_nameCre-nkb-1
SpeciesCaenorhabditis remanei
HistoryVersion_change103 Jul 2008 11:46:53WBPerson4055EventCreated
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCre-nkb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnkb
RNASeq_FPKMWBls:000000435.9666From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
36.1779From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
36.3892From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:0000027143.802From_analysisRNASeq.remanei.WBls:0000027.control_mean
157.983From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
158.098From_analysisRNASeq.remanei.WBls:0000027.control_median
158.212From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
160.042From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
98.97From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:0000038102.03From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
48.6754From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
60.756From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
70.4871From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:0000041103.246From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
78.4684From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
79.2353From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
80.6772From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
81.4152From_analysisRNASeq.remanei.WBls:0000041.control_median
82.1531From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
84.8475From_analysisRNASeq.remanei.WBls:0000041.control_mean
85.3047From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
WBls:0000063 (12)
WBls:000010184.359From_analysisRNASeq.remanei.total_over_all_stages.control_median
87.1119From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00170068
00170069
00170070
Ortholog (34)
ParalogWBGene00059252Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00065301Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in potassium ion transport and sodium ion transport. Predicted to be part of sodium:potassium-exchanging ATPase complex. Is an ortholog of C. elegans nkb-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE08143
Corresponding_transcriptCRE08143.1
Other_sequence (35)
Experimental_infoExpr_patternExpr1104264
Microarray_resultsGPL14146_CRE08143_792-851_0.859_32_A
MethodGene