WormBase Tree Display for Gene: WBGene00077467
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| WBGene00077467 | SMap | S_parent | Sequence | ZK218 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rrn-4.4 | Person_evidence | WBPerson1983 | |||||
| Sequence_name | ZK218.18 | ||||||||
| Molecular_name | ZK218.18 | ||||||||
| Other_name | CELE_ZK218.18 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | rrn-4.4 | ||||||||
| DB_info | Database | AceView | gene | 5R599a | |||||
| NDB | locus_tag | CELE_ZK218.18 | |||||||
| NCBI | gene | 13217723 | |||||||
| RefSeq | protein | NR_070094.1 | |||||||
| RNAcentral | URSid | URS000007CA7A | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 Nov 2007 11:48:53 | WBPerson4025 | Event | Created | |||
| 2 | 25 Sep 2013 10:59:47 | WBPerson2970 | Name_change | CGC_name | rrn-4.4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001637 | |||||||
| Gene_class | rrn | ||||||||
| Allele (17) | |||||||||
| In_cluster | rrs-1_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Concise_description | rrn-4.4 (ZK218.18) encodes a 5s ribosomal RNA (rRNA), a component of the large ribosomal subunit and synthesised by RNA polymerase III; As this forms a major component of the ribosome, it is essential for all protein synthesis in the cell. | Curator_confirmed | WBPerson1983 | |||||
| Date_last_updated | 24 Sep 2013 00:00:00 | ||||||||
| Automated_description | Is affected by cep-1 and swsn-9 based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | ZK218.18 | |||||||
| Experimental_info | RNAi_result | WBRNAi00019318 | Inferred_automatically | RNAi_primary | |||||
| Expression_cluster | WBPaper00045380:cep-1(gk138)_upregulated_normal | ||||||||
| WBPaper00060764:swsn-9(ok1354)_downregulated | |||||||||
| WBPaper00065975:P-body_vs_oocyte_depleted | |||||||||
| WBPaper00065975:P-body_vs_WholeAnimal_depleted | |||||||||
| Map_info | Map | V | Position | 12.8008 | |||||
| Positive | Positive_clone | ZK218 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
