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WormBase Tree Display for Gene: WBGene00075708

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Name Class

WBGene00075708SMapS_parentSequenceCrem_Contig1031
IdentityVersion3
NameCGC_nameCre-nhr-4.1From_analysisInferred_from_orthology
Sequence_nameCRE22212
Molecular_nameCRE22212
CRE22212.1
RP38521
Other_namecr01.sctg2787.wum.2
Public_nameCre-nhr-4.1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
203 Jul 2008 11:46:50WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE22212
Other_namecr01.sctg2787.wum.2
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-nhr-4.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000040.385172From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.539796From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.69442From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:00000271.10739From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
3.31923From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
3.49531From_analysisRNASeq.remanei.WBls:0000027.control_median
3.67138From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
4.16914From_analysisRNASeq.remanei.WBls:0000027.control_mean
8.57856From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:00000380.17705From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
0.709548From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
0.801646From_analysisRNASeq.remanei.WBls:0000038.control_mean
1.51834From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000410.963835From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.10457From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.12521From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.36897From_analysisRNASeq.remanei.WBls:0000041.control_median
1.44575From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.61272From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
1.8655From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
2.00266From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:00001011.1163From_analysisRNASeq.remanei.total_over_all_stages.control_median
1.54158From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00168596
00168597
00168598
00168599
Ortholog (29)
Paralog (273)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE22212
Corresponding_transcriptCRE22212.1
Other_sequenceDviv_isotig00042
MH02956
Oden_isotig19183
MHC00041_1
Dviv_isotig00041
HBC17808_1
EX010038.1
Hbac_isotig04554
Dviv_isotig00040
Experimental_infoExpr_patternExpr1102441
Microarray_resultsGPL14146_CRE22212_813-872_0.836_53_A
GPL14146_CRE29874_275-334_0.778_97_A
MethodGene