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WormBase Tree Display for Gene: WBGene00072099

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Name Class

WBGene00072099SMapS_parentSequenceCrem_Contig49
IdentityVersion4
NameCGC_nameCre-nhr-4.2From_analysisInferred_from_orthology
Sequence_nameCRE29874
Molecular_nameCRE29874
CRE29874.1
RP13939
Other_namecr01.sctg310.wum.1
Cre-nhr-4From_analysisInferred_from_orthology
Public_nameCre-nhr-4.2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:29WBPerson1847EventCreated
229 Nov 2007 17:00:47WBPerson2970Name_changeCGC_nameCre-nhr-4
303 Jul 2008 11:46:35WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE29874
Other_namecr01.sctg310.wum.1
420 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-nhr-4.2
Other_nameCre-nhr-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000042.11845From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
2.44807From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
2.77768From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002711.4132From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.16567From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
14.1067From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
8.57856From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
8.81603From_analysisRNASeq.remanei.WBls:0000027.control_mean
9.99588From_analysisRNASeq.remanei.WBls:0000027.control_median
WBls:00000380.413117From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
4.17735From_analysisRNASeq.remanei.WBls:0000038.control_mean
5.02344From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
7.09548From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000411.63934From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.68782From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.13006From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.30305From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
2.33707From_analysisRNASeq.remanei.WBls:0000041.control_median
2.3711From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
2.37279From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
2.40628From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
WBls:0000063 (12)
WBls:00001012.33707From_analysisRNASeq.remanei.total_over_all_stages.control_median
3.45701From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00165918
00165919
00165920
00165921
Ortholog (29)
Paralog (273)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE29874
Corresponding_transcriptCRE29874.1
Other_sequenceCBC06120_1
Experimental_infoExpr_patternExpr1094359
Microarray_resultsGPL14146_CRE29874_1447-1506_0.967_1_B
MethodGene