WormBase Tree Display for Gene: WBGene00071321

WBGene00071321 SMap: S_parent: Sequence: Crem_Contig415
  Identity: Version: 3
    Name: CGC_name: Cre-lin-61 From_analysis: Inferred_from_orthology
      Sequence_name: CRE07873
      Molecular_name: CRE07873
        CRE07873.1
        RP36332
      Other_name: cr01.sctg243.wum.1
      Public_name: Cre-lin-61
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 03 Jul 2008 11:46:32 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE07873
                Other_name: cr01.sctg243.wum.1
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-lin-61
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lin
    RNASeq_FPKM: WBls:0000004 25.1207 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        27.1983 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        29.2759 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 1.72374 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        3.52268 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        5.43674 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        5.4425 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        7.35079 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        9.17281 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 0.981803 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        1.51614 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        1.68585 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        1.88077 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 10.7847 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        11.8953 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        13.1997 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        24.5658 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        25.0918 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        35.932 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        36.2327 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        42.5062 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
      WBls:0000063 (12)
      WBls:0000101 12.4312 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        9.63791 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00165287
      00165288
    Ortholog (32)
    Paralog: WBGene00060208 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00060338 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00070926 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00081705 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans lin-61. In C. elegans, lin-61 is involved in vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE07873
    Corresponding_transcript: CRE07873.1
    Other_sequence: JI481579.1
      JI470294.1
      JI464346.1
      JI481191.1
      Tcol_isotig05626
  Experimental_info: Expr_pattern: Expr1095104
    Microarray_results: GPL14146_CRE07873_1294-1353_0.950_2_C
      GPL14146_CRE07873_1447-1506_0.927_16_B
      GPL14146_CRE07873_1550-1609_0.930_14_A
  Method: Gene