WormBase Tree Display for Gene: WBGene00069596

WBGene00069596 SMap: S_parent: Sequence: Crem_Contig33
  Identity: Version: 3
    Name: CGC_name: Cre-dpy-21 From_analysis: Inferred_from_orthology
      Sequence_name: CRE21288
      Molecular_name: CRE21288
        CRE21288.1
        RP30832
      Other_name: cr01.sctg153.wum.27
      Public_name: Cre-dpy-21
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-dpy-21
        3 03 Jul 2008 11:46:25 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE21288
                Other_name: cr01.sctg153.wum.27
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dpy
    RNASeq_FPKM: WBls:0000004 24.8166 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        24.8298 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        24.843 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 106.25 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        107.212 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        109.077 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        109.915 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        110.791 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        112.016 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        113.447 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        114.27 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        116.214 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        117.526 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        119.028 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        121.842 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        124.341 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        124.879 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        133.632 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        135.194 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
        136.317 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        138.531 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        147.361 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        153.704 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        153.877 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        154.011 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        154.679 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
        158.854 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        168.907 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        171.484 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        174.197 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        180.474 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
        190.312 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
        194.137 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        195.083 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        203.444 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        204.446 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        40.2898 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
        41.7313 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        46.2996 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        54.0234 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        61.7439 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        62.516 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        64.0439 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
        69.454 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        69.6545 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        70.9012 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        73.4749 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        75.9392 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        76.0227 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        76.9073 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        81.8541 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        82.4681 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        86.1611 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        88.4611 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        88.7063 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        93.0212 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
      WBls:0000027 13.4209 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        29.6706 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        31.9394 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        32.6714 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        33.4034 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        39.9188 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
      WBls:0000038 10.9138 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        12.3018 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        12.8833 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        13.1084 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 11.7127 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        11.7196 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        11.7265 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        12.2957 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        12.3579 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        19.8029 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        8.83828 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        9.33568 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 10.1855 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        10.3723 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        10.5591 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        10.7711 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        10.9363 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        11.452 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        13.1507 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        16.4896 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        8.63305 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        9.01402 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        9.25635 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        9.85118 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
      WBls:0000101 11.7196 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        14.9378 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00163940
    Ortholog: WBGene00001080 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028049 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00150660 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00141536 Caenorhabditis brenneri From_analysis: OMA
      WBGene00137687 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00227186 Brugia malayi From_analysis: WormBase-Compara
      WBGene00241713 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00100951 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g1212 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9231 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2393 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4867 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18411 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3775 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17010 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8068 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3655 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23418 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00192.g6671 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-dpy-21 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21877 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_06625.g36802 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_07179.g37463 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_20834 Caenorhabditis latens From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02709 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_50407100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g17585 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00265818 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00301862 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301918 Trichuris muris From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in nucleus. Is an ortholog of C. elegans dpy-21. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE21288
    Corresponding_transcript: CRE21288.1
    Other_sequence: TM03546
      MJ04278
      CR04347
      CR07691
      Dviv_isotig07860
      GPC03376_1
      MH10598
      Oden_isotig22878
      CB931680.1
      GP00587
      TX01418
      Dviv_isotig23503
      JI165096.1
      TMC04271_1
      CRC03547_1
      HC06995
      PT02788
      Oden_isotig26921
      CBC03092_1
      CR11692
      MC03136
      CR12089
      Acan_isotig16890
      GP00849
      PT02105
      PTC02306_1
      MH08828
      Dviv_isotig07859
      PT03534
      HC06312
  Experimental_info: Expr_pattern: Expr1107122
    Microarray_results: GPL14146_CRE21288_4126-4185_0.669_372_B
      GPL14146_CRE21288_4927-4986_0.861_42_A
      GPL14146_CRE21288_5028-5087_0.950_4_C
  Method: Gene