WormBase Tree Display for Gene: WBGene00060199

WBGene00060199 SMap: S_parent: Sequence: Crem_Contig24
  Identity: Version: 4
    Name: CGC_name: Cre-arr-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE17210
      Molecular_name: CRE17210
        CRE17210.1
        RP21292
      Other_name: cr01.sctg17.wum.85
        cr01.sctg17.wum.85.2
      Public_name: Cre-arr-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-arr-1
        3 03 Jul 2008 11:45:31 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE17210
                Other_name: cr01.sctg17.wum.85
        4 03 Jul 2008 11:48:45 WBPerson4055 Event: Acquires_merge: WBGene00060200
              Name_change: Other_name: cr01.sctg17.wum.85.2
      Acquires_merge: WBGene00060200
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: arr
    RNASeq_FPKM: WBls:0000004 23.5707 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        28.4568 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        33.3429 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 11.2934 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        14.2417 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        16.0492 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        16.5132 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        17.0579 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        17.4369 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        17.6606 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        17.9252 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        18.1479 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        20.8164 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
        20.9732 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        21.0514 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        21.0759 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        21.2056 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        22.0688 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        22.2385 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        23.2897 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
        23.5486 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        24.4357 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        24.4663 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        24.7183 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        24.9785 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        25.3962 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
        25.655 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        25.9715 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        26.2145 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        26.3523 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        26.5684 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        26.572 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        26.6294 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        26.7923 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        27.2827 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        27.8084 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        27.8413 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        28.6382 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        28.703 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        29.6885 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
        30.4959 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        30.972 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        31.3155 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        32.6864 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        32.7016 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        33.1387 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
        33.8925 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        34.3623 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        36.546 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
        37.4007 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        43.7412 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        46.1477 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        48.7278 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        50.5786 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        52.4416 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        6.44277 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
      WBls:0000027 15.7984 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        17.638 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        18.0574 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        18.4767 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        22.196 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        4.88269 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 10.0399 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        12.7448 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        13.6669 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        3.70809 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 10.0372 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        11.15 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        6.25085 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        6.68731 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        7.49074 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        8.12617 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        8.39629 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        8.76161 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 12.5982 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        2.41135 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        3.3357 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        4.96456 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        5.43996 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        5.69027 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        5.81945 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        5.94863 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        6.41082 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        7.09598 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        7.97622 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        8.64736 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
      WBls:0000101 10.1813 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        7.73348 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00155669
    Ortholog: WBGene00000195 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029948 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00149199 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121774 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00224589 Brugia malayi From_analysis: WormBase-Compara
      WBGene00239441 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00305127 Pristionchus pacificus From_analysis: WormBase-Compara
      CSP21.g12175 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10940 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13378 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6288 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6148 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g55 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19042 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7305 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11226 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-arr-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold412.g1092 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00225.g7461 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03175 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_022237 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13070 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14595 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0013400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18355 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00258058 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292200 Trichuris muris From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in signal transduction. Is an ortholog of C. elegans arr-1. In C. elegans, arr-1 is involved in positive regulation of growth rate. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE17210
    Corresponding_transcript: CRE17210.1
    Other_sequence: CBC03813_1
      HGC05621_1
      HG08386
      Acan_isotig07598
      Dviv_isotig31813
      CR10198
      Dviv_isotig22300
      GRC00456_1
      JI475832.1
      Tcir_isotig23151
      CR10197
      FG347477.1
      Dviv_isotig22299
      CRC06046_1
      GR13513
      GR14288
      Oden_isotig26598
      JI168491.1
      HG09572
      Tcol_isotig12780
      Oden_isotig26746
  Experimental_info: Expr_pattern: Expr1098604
    Microarray_results: GPL14146_CRE17210_1152-1211_0.966_1_A
      GPL14146_CRE17210_910-969_0.950_2_B
      GPL14146_CRE17210_992-1051_0.939_3_C
  Method: Gene