WormBase Tree Display for Gene: WBGene00053739

WBGene00053739 SMap: S_parent: Sequence: Crem_Contig1
  Identity: Version: 3
    Name: CGC_name: Cre-lov-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE01649
      Molecular_name: CRE01649
        CRE01649.1
        RP50224
      Other_name: cr01.sctg2.wum.519
      Public_name: Cre-lov-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:45 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE01649
                Other_name: cr01.sctg2.wum.519
        3 04 Jul 2008 11:06:34 WBPerson4055 Name_change: CGC_name: Cre-lov-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lov
    RNASeq_FPKM: WBls:0000004 0.027012 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.054024 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (52)
      WBls:0000027 0.041342 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        0.462312 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0.472329 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        0.567115 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        0.661901 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0.673676 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.209311 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        1.25579 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        1.67044 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        1.88761 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.697106 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.865509 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.64772 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.93305 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.06146 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.47519 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.91781 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        2.99494 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 0.781308 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        1.2148 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (23)
    Paralog: WBGene00069441 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00075052 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00054236 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072955 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: PLAT/LH2 domain; Polycystin cation channel, PKD1/PKD2; Polycystin cation channel; CUB-like domain; PLAT/LH2 domain superfamily; and GPS motif. Is an ortholog of C. elegans lov-1. In C. elegans, lov-1 is involved in response to hermaphrodite contact and vulval location. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE01649
    Corresponding_CDS_history: CRE01649:rp208
    Corresponding_transcript: CRE01649.1
    Other_sequence: JO470013.1
      JI164556.1
  Experimental_info: Expr_pattern: Expr1111526
    Microarray_results: GPL14146_CRE01649_9719-9778_0.787_313_C
      GPL14146_CRE01649_9779-9838_0.818_141_B
      GPL14146_CRE01649_9996-10055_0.846_98_A
  Method: Gene