WormBase Tree Display for Gene: WBGene00069441

WBGene00069441 SMap: S_parent: Sequence: Crem_Contig152
  Identity: Version: 3
    Name: CGC_name: Cre-pkd-2 From_analysis: Inferred_from_orthology
      Sequence_name: CRE22069
      Molecular_name: CRE22069
        CRE22069.1
        RP17317
      Other_name: cr01.sctg148.wum.14
      Public_name: Cre-pkd-2
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:28 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-pkd-2
        3 03 Jul 2008 11:46:25 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE22069
                Other_name: cr01.sctg148.wum.14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pkd
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
            RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
            RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
      WBls:0000024 (46)
      WBls:0000027 0.012964 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0.051856 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
            RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 0.155782 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        0.200437 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        0.235927 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.351562 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 0.059204 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.103428 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.144576 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        11.3807 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        11.8317 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        4.97205 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        5.55319 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        9.79952 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 0.042458 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        0.084915 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        1.56326 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        1.9503 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        3.88206 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        4.06097 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        9.91179 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
      WBls:0000101 0.07206 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        2.06084 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00163826
      00163827
    Ortholog (42)
    Paralog: WBGene00053739 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00075052 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00072955 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00054236 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00057712 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00084837 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
      WBGene00084838 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Predicted to be located in membrane. Is an ortholog of C. elegans pkd-2. In C. elegans, pkd-2 is involved in calcium ion transport; response to hermaphrodite contact; and vulval location. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE22069
    Corresponding_transcript: CRE22069.1
  Experimental_info: Expr_pattern: Expr1105076
    Microarray_results: GPL14146_CRE04067_249-308_0.957_1_A
      GPL14146_CRE13219_680-739_0.871_32_C
  Method: Gene