WormBase Tree Display for Gene: WBGene00052271

WBGene00052271 SMap: S_parent: Sequence: Crem_Contig5
  Identity: Version: 5
    Name: CGC_name: Cre-nhr-161 From_analysis: Inferred_from_orthology
      Sequence_name: CRE27294
      Molecular_name: CRE27294
        CRE27294.1
        RP15696
      Other_name: cr01.sctg1.wum.159
      Public_name: Cre-nhr-161
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:31 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE27294
                Other_name: cr01.sctg1.wum.159
        3 04 Jul 2008 11:06:34 WBPerson4055 Name_change: CGC_name: Cre-nhr-161
        4 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Removed
        5 08 Feb 2019 15:42:26 WBPerson1983 Name_change: CGC_name: Cre-nhr-161
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000004 0.369314 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        0.567865 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        0.766417 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.184378 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        1.43891 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.62749 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        2.69345 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        3.63214 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.87555 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        4.17701 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        4.44965 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 1.82005 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        2.56492 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.84561 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.90524 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.98774 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.07023 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        3.08141 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        3.63181 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 0.794315 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        1.06617 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        1.44315 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        1.44922 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        1.82012 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        1.92329 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        2.02016 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        2.2712 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        4.59697 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
      WBls:0000101 1.83993 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        1.87171 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00147491
      00147492
      00147493
      00147494
    Ortholog (22)
    Paralog (251)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-161. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE27294
    Corresponding_transcript: CRE27294.1
  Experimental_info: Expr_pattern: Expr1114003
    Microarray_results: GPL14146_CRE27294_496-555_0.919_9_C
      GPL14146_CRE27294_653-712_0.911_11_A
      GPL14146_CRE27294_739-798_0.897_18_B
  Remark: [180319 gw3] The CGC name Cre-nhr-161 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson4025
  Method: Gene