WormBase Tree Display for Gene: WBGene00052064

WBGene00052064 SMap: S_parent: Sequence: Crem_Contig0
  Identity: Version: 3
    Name: CGC_name: Cre-lin-25.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE00450
      Molecular_name: CRE00450
        CRE00450.1
        RP48567
      Other_name: cr01.sctg0.wum.1041
      Public_name: Cre-lin-25.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:30 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE00450
                Other_name: cr01.sctg0.wum.1041
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-lin-25.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lin
    RNASeq_FPKM: WBls:0000004 17.1455 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        17.5473 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        17.9491 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 10.1098 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        1.20476 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        6.48622 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        7.071 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        7.31516 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        7.55931 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.516119 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        3.96216 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        4.69555 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        6.67482 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 1.8154 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        2.16804 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.33419 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        2.73322 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.73517 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        3.13224 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.335 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.62613 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 2.15684 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        4.11995 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (24)
    Paralog: WBGene00052589 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is an ortholog of C. elegans lin-25. In C. elegans, lin-25 is involved in defense response to Gram-positive bacterium and vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE00450
    Corresponding_transcript: CRE00450.1
    Other_sequence: Tcol_isotig00870
      Tcol_isotig00869
      Tcol_isotig00874
      Tcol_isotig00871
      Tcol_isotig00872
      Tcol_isotig00876
      Tcol_isotig00873
      Tcol_isotig00875
  Experimental_info: Expr_pattern: Expr1097581
    Microarray_results: GPL14146_CRE00450_3369-3428_0.936_7_A
  Method: Gene