WormBase Tree Display for Gene: WBGene00052028

WBGene00052028 SMap: S_parent: Sequence: Crem_Contig0
  Identity: Version: 3
    Name: CGC_name: Cre-rgl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE00425
      Molecular_name: CRE00425
        CRE00425.1
        RP32009
      Other_name: cr01.sctg0.wum.1006
      Public_name: Cre-rgl-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-rgl-1
        3 03 Jul 2008 11:44:29 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE00425
                Other_name: cr01.sctg0.wum.1006
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rgl
    RNASeq_FPKM: WBls:0000004 5.94721 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        6.75842 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        7.56963 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.943766 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        10.2702 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        10.8431 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        11.4159 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        11.643 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        8.56822 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 11.9082 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        11.918 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        2.61208 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        8.81276 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
      WBls:0000041 3.32308 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        3.38409 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        3.45097 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        3.479 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.49325 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        3.50703 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        3.51545 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        3.77891 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
      WBls:0000063 (12)
      WBls:0000101 4.36114 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        5.60066 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00147257
      00147258
      00147259
    Ortholog (31)
    Paralog: WBGene00051706 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00054934 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00057913 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00065658 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00071955 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072337 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00077836 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in small GTPase mediated signal transduction. Is an ortholog of C. elegans rgl-1. In C. elegans, rgl-1 is involved in epidermal growth factor receptor signaling pathway and positive regulation of vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE00425
    Corresponding_transcript: CRE00425.1
    Other_sequence (47)
  Experimental_info: Expr_pattern: Expr1100570
    Microarray_results: GPL14146_CRE00425_1033-1092_0.728_214_C
      GPL14146_CRE00425_1902-1961_0.911_13_B
      GPL14146_CRE00425_2178-2237_0.890_25_A
  Method: Gene