WormBase Tree Display for Gene: WBGene00051331

WBGene00051331 SMap: S_parent: Sequence: Crem_Contig0
  Identity: Version: 3
    Name: CGC_name: Cre-clc-5 From_analysis: Inferred_from_orthology
      Sequence_name: CRE00533
      Molecular_name: CRE00533
        CRE00533.1
        RP15226
      Other_name: cr01.sctg0.wum.334
      Public_name: Cre-clc-5
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:49 WBPerson2970 Name_change: CGC_name: Cre-clc-5
        3 03 Jul 2008 11:44:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE00533
                Other_name: cr01.sctg0.wum.334
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clc
    RNASeq_FPKM: WBls:0000004 1.88473 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        2.8947 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        3.90467 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 10.5037 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        10.8441 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        1.11779 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        11.6559 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
        11.7531 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        11.9219 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        14.3165 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        14.6558 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        14.9589 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        16.4575 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        16.4891 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        18.4093 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        19.0278 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        19.5889 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
        2.03382 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        20.4049 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        21.6535 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        21.8451 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
        2.23864 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        23.7759 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        2.44598 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
        3.0566 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        3.15692 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        3.26814 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        3.44329 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        3.47906 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        3.65062 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        3.96586 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        4.35844 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        4.49024 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        4.58262 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        4.66183 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        4.88663 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        5.03114 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        5.34609 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        5.50078 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        6.0932 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        6.33284 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        6.43777 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
        6.45107 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        6.51465 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        6.91617 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        6.99694 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        7.1997 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        7.32024 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        7.87464 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        7.96969 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        8.00701 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        8.23335 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        8.58286 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        8.94123 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
        9.64981 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
      WBls:0000027 10.5725 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        11.5156 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        1.40247 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        6.96128 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        7.61296 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        8.76689 From_analysis: RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 3.78697 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        3.92546 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        4.6105 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        6.11908 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 0.936426 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        1.15177 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.585 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        2.35563 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.36749 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.14997 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        3.5519 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        3.75871 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
      WBls:0000063 0.760579 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        1.15921 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        1.33652 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        1.53963 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        1.6603 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        1.74275 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        2.42482 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        2.88434 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        2.97211 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        3.32265 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
      WBls:0000101 2.65458 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        3.10806 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00146552
    Ortholog: WBGene00000526 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00036567 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00139707 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00133708 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00118277 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00222135 Brugia malayi From_analysis: WormBase-Compara
      WBGene00240485 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g2856 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1609 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g11407 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19935 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2909 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20517 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1734 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6123 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16059 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21232 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00442.g10910 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-clc-5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12463 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00158.g5900 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00176 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_024774 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01110 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_X0205000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19409 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00258982 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00071890 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00052497 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00051332 Caenorhabditis remanei From_analysis: TreeFam
            GeneACeDB-Compara
      WBGene00051740 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00072428 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00066792 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00082818 Caenorhabditis remanei From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to be located in membrane. Is an ortholog of C. elegans clc-5. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE00533
    Corresponding_transcript: CRE00533.1
    Other_sequence: Dviv_isotig17242
      JI465711.1
      Oden_isotig24581
      Acan_isotig10937
      BMC01025_1
      JI172431.1
      WBC00597_1
      PPC09087_1
      EW742151.1
      JI470378.1
      Tcir_isotig11738
      CD374722.1
      ACC31311_1
      OVC00635_1
      AA294497.1
      Dviv_isotig17243
      AA294591.1
      AA294670.1
  Experimental_info: Expr_pattern: Expr1095302
    Microarray_results: GPL14146_CRE00533_251-310_0.911_8_A
      GPL14146_CRE00533_455-514_0.912_7_C
      GPL14146_CRE00533_544-603_0.798_68_B
  Method: Gene