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WormBase Tree Display for Gene: WBGene00046088

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Name Class

WBGene00046088SMapS_parentSequenceY105C5A
IdentityVersion1
NameCGC_name21ur-409Person_evidenceWBPerson6396
Sequence_nameY105C5A.89
Molecular_nameY105C5A.89
Other_nameCELE_Y105C5A.89Accession_evidenceNDBBX284604
Public_name21ur-409
DB_infoDatabaseNDBlocus_tagCELE_Y105C5A.89
NCBIgene13206263
RefSeqproteinNR_063853.1
RNAcentralURSidURS00000DF71B
SpeciesCaenorhabditis elegans
HistoryVersion_change127 Jul 2007 11:38:03WBPerson1847EventCreated
StatusLive
Gene_infoBiotypeSO:0001638
Gene_class21ur
Allele (11)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in neurons based on RNA-seq studies. Is affected by camt-1 and lpd-3 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptY105C5A.89
Experimental_infoExpression_clusterWBPaper00056868:P.aeruginosa_downregulated_smallRNA
WBPaper00061902:camt-1(ok515)_regulated_RMG
WBPaper00062103:neuron_enriched
WBPaper00064661:lpd-3(ok2138)_upregulated
Map_infoMapIVPosition14.2674
PositivePositive_cloneY105C5AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028915
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene