WormBase Tree Display for Gene: WBGene00045364
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| WBGene00045364 | SMap | S_parent | Sequence | F11D11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-250 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F11D11.14 | ||||||||
| Molecular_name | F11D11.14 | ||||||||
| F11D11.14.1 | |||||||||
| CE40841 | |||||||||
| Other_name | CELE_F11D11.14 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-250 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00045364 | |||||
| NDB | locus_tag | CELE_F11D11.14 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00045364|UniProtKB=A4UVL3 | |||||||
| family | PTHR47629 | ||||||||
| NCBI | gene | 6418824 | |||||||
| RefSeq | protein | NM_001129439.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322199 | |||||||
| TrEMBL | UniProtAcc | A4UVL3 | |||||||
| UniProt_GCRP | UniProtAcc | A4UVL3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 12 Apr 2007 12:25:08 | WBPerson4025 | Event | Created | |||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-250 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (92) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (117) | |||||||||
| Structured_description | Automated_description | Enriched in NSM and neurons based on tiling array and RNA-seq studies. Is affected by several genes including aak-2; set-2; and aak-1 based on RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; PAN-3 domain; C-type lectin-like/link domain superfamily; PAN-like domain; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F11D11.14 | |||||||
| Corresponding_transcript | F11D11.14.1 | ||||||||
| Other_sequence | GP03376 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00013124 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044377 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019582 | ||||||||
| Expr1148322 | |||||||||
| Expr2010147 | |||||||||
| Drives_construct | WBCnstr00023251 | ||||||||
| Construct_product | WBCnstr00023251 | ||||||||
| Microarray_results | SMD_F11D11.10 | ||||||||
| A_12_P151145 | |||||||||
| A_12_P151146 | |||||||||
| GPL13394_WBGene00045364 | |||||||||
| GPL13914_F11D11.14 | |||||||||
| GPL14144_F11D11.14_661-720_0.950_6_A | |||||||||
| GPL19516_CGZ0015579 | |||||||||
| GPL21109_F11D11.14 | |||||||||
| Expression_cluster (15) | |||||||||
| Map_info | Map | V | Position | 17.5859 | Error | 0.004377 | |||
| Positive | Positive_clone | F11D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
