WormBase Tree Display for Gene: WBGene00045194
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| WBGene00045194 | SMap | S_parent | Sequence | C33A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | smy-1 | Person_evidence | WBPerson71 | |||||
| Sequence_name | C33A12.22 | ||||||||
| Molecular_name | C33A12.22 | ||||||||
| Other_name | CeN32 | ||||||||
| CELE_C33A12.22 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | smy-1 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_C33A12.22 | |||||
| NCBI | gene | 4926943 | |||||||
| RefSeq | protein | NR_003443.1 | |||||||
| RNAcentral | URSid | URS000051DE23 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 11 Dec 2006 16:39:13 | WBPerson1983 | Event | Created | |||
| 2 | 15 Dec 2006 10:34:55 | WBPerson1983 | Name_change | CGC_name | smy-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001268 | |||||||
| Gene_class | smy | ||||||||
| Allele | WBVar01500079 | ||||||||
| WBVar01498996 | |||||||||
| WBVar00259589 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; daf-12; and jmjd-5 based on tiling array; microarray; and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_transcript | C33A12.22 | |||||||
| Experimental_info | RNAi_result | WBRNAi00041730 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011508 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029449 | Inferred_automatically | RNAi_primary | |||||||
| Expression_cluster | WBPaper00040221:DAF-12_target_ALF4 | ||||||||
| WBPaper00055386:daf-2(e1370)_downregulated | |||||||||
| WBPaper00056868:P.aeruginosa_upregulated_smallRNA | |||||||||
| WBPaper00057068:ints-4(RNAi)_upregulated | |||||||||
| WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium | |||||||||
| WBPaper00059117:B.subtilis_upregulated | |||||||||
| WBPaper00062156:jmjd-5(zr1234)_upregulated | |||||||||
| Map_info | Map | IV | Position | 4.28863 | |||||
| Positive | Positive_clone | C33A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032457 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
