WormBase Tree Display for Gene: WBGene00044187

WBGene00044187 SMap: S_parent: Sequence: F25C8
  Identity: Version: 2
    Name: CGC_name: ttll-9 Person_evidence: WBPerson625
      Sequence_name: F25C8.5
      Molecular_name: F25C8.5
        F25C8.5.1
        CE38330
      Other_name: CELE_F25C8.5 Accession_evidence: NDB BX284605
      Public_name: ttll-9
    DB_info: Database: WormFlux gene WBGene00044187
        NDB locus_tag CELE_F25C8.5
        Panther gene CAEEL|WormBase=WBGene00044187|UniProtKB=Q564U4
          family PTHR12241
        NCBI gene 3564837
        RefSeq protein NM_001028670.2
        KEGG KEGG_id 6.-.-.-
        NemaPath KEGG_id 6.-.-.-
        SwissProt UniProtAcc Q564U4
        UniProt_GCRP UniProtAcc Q564U4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Mar 2005 18:02:37 WBPerson1846 Event: Created
        2 29 May 2007 08:52:01 WBPerson2970 Name_change: CGC_name: ttll-9
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttll
    Allele (77)
    Strain: WBStrain00054963
    RNASeq_FPKM (74)
    GO_annotation: 00081105
      00081106
      00081107
      00081108
      00081109
      00081110
      00081111
      00081112
      00146008
    Ortholog (29)
    Paralog: WBGene00008331 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010630 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00014232 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019230 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00008405 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: ttll-9 encodes a putative tubulin polyaminoacid ligase orthologous tohuman TTLL9. Paper_evidence: WBPaper00029411
            WBPaper00029412
            WBPaper00029413
            WBPaper00029414
            WBPaper00029415
            WBPaper00029416
          Curator_confirmed: WBPerson567
          Date_last_updated: 29 May 2007 00:00:00
      Automated_description: Predicted to enable tubulin binding activity and tubulin-glutamic acid ligase activity. Predicted to be involved in microtubule cytoskeleton organization. Predicted to be located in cilium. Is an ortholog of human TTLL9 (tubulin tyrosine ligase like 9). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F25C8.5
    Corresponding_transcript: F25C8.5.1
    Other_sequence (151)
    Associated_feature: WBsf647773
      WBsf1003663
  Experimental_info: Expr_pattern: Expr1018006
      Expr1149402
      Expr2017570
      Expr2035709
    Microarray_results (13)
    Expression_cluster (20)
    Interaction: WBInteraction000563343
      WBInteraction000563344
      WBInteraction000563345
      WBInteraction000563347
  Map_info: Map: V Position: 25.7502 Error: 0.026168
    Positive: Positive_clone: F25C8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00050134
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene