WormBase Tree Display for Gene: WBGene00044107
expand all nodes | collapse all nodes | view schema
WBGene00044107 | SMap | S_parent | Sequence | F58G6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 4K415 | |||||
WormFlux | gene | WBGene00044107 | |||||||
NDB | locus_tag | CELE_F58G6.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00044107|UniProtKB=Q5CZ44 | |||||||
family | PTHR12483 | ||||||||
NCBI | gene | 3565521 | |||||||
RefSeq | protein | NM_001129310.3 | |||||||
NM_001268485.4 | |||||||||
NM_001028076.2 | |||||||||
TREEFAM | TREEFAM_ID | TF315142 | |||||||
TrEMBL | UniProtAcc | A5JYS6 | |||||||
C6KRJ4 | |||||||||
Q5CZ44 | |||||||||
UniProt_GCRP | UniProtAcc | Q5CZ44 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 04 Feb 2005 13:21:42 | WBPerson1983 | Event | Split_from | WBGene00010273 | ||
2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | chca-1 | ||||
Split_from | WBGene00010273 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | chca | ||||||||
Allele (29) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00004687 | ||||||||
00004688 | |||||||||
00004689 | |||||||||
00004690 | |||||||||
00004691 | |||||||||
00004692 | |||||||||
00145985 | |||||||||
00145986 | |||||||||
00145987 | |||||||||
Ortholog (26) | |||||||||
Paralog | WBGene00010274 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010277 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00017170 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00017852 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00017954 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019674 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021975 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00045053 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00045052 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable copper ion transmembrane transporter activity. Predicted to be involved in copper ion transmembrane transport. Predicted to be located in late endosome membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F58G6.9a | |||||||
F58G6.9b | |||||||||
F58G6.9c | |||||||||
Corresponding_transcript | F58G6.9a.1 | ||||||||
F58G6.9a.2 | |||||||||
F58G6.9b.1 | |||||||||
F58G6.9b.2 | |||||||||
F58G6.9c.1 | |||||||||
F58G6.9c.2 | |||||||||
Associated_feature | WBsf646243 | ||||||||
WBsf646244 | |||||||||
WBsf646245 | |||||||||
WBsf981807 | |||||||||
WBsf1017986 | |||||||||
WBsf228852 | |||||||||
WBsf228853 | |||||||||
Experimental_info | RNAi_result | WBRNAi00112358 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049057 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016019 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr13774 | ||||||||
Expr1019796 | |||||||||
Expr1152805 | |||||||||
Expr2004421 | |||||||||
Expr2022644 | |||||||||
Drives_construct | WBCnstr00023759 | ||||||||
Construct_product (2) | |||||||||
Microarray_results (25) | |||||||||
Expression_cluster (288) | |||||||||
Map_info | Map | IV | Position | 4.34716 | |||||
Positive | Positive_clone | F58G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00065331 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |